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Refactoring not done yet, still need to do RSassert

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This commit is contained in:
elvis
2025-08-24 02:01:24 +02:00
parent 8a492c7b8a
commit 3a4c4d43c2
18 changed files with 705 additions and 747 deletions
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30
src/rsprocess/transitions.rs
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@ -1,17 +1,21 @@
//! Module for helper structure for simulation
use super::structure::{RSlabel, RSprocess, RSset, RSsystem};
use std::rc::Rc;
use super::label::Label;
use super::process::Process;
use super::set::Set;
use super::system::System;
#[derive(Clone, Debug)]
pub struct TransitionsIterator<'a> {
choices_iterator: std::vec::IntoIter<(Rc<RSset>, Rc<RSprocess>)>,
system: &'a RSsystem,
choices_iterator: std::vec::IntoIter<(Rc<Set>, Rc<Process>)>,
system: &'a System,
}
impl<'a> TransitionsIterator<'a> {
pub fn from(
system: &'a RSsystem
system: &'a System
) -> Result<TransitionsIterator<'a>, String> {
match system.delta.unfold(&system.context_process,
&system.available_entities) {
@ -25,10 +29,10 @@ impl<'a> TransitionsIterator<'a> {
}
impl<'a> Iterator for TransitionsIterator<'a> {
type Item = (RSlabel, RSsystem);
type Item = (Label, System);
/// Creates the next arc from the current system.
fn next(&mut self) -> Option<(RSlabel, RSsystem)> {
fn next(&mut self) -> Option<(Label, System)> {
let (c, k) = self.choices_iterator.next()?;
let t = self.system.available_entities.union(c.as_ref());
let (
@ -40,11 +44,11 @@ impl<'a> Iterator for TransitionsIterator<'a> {
) =
self.system.reaction_rules.iter().fold(
(
RSset::new(), // reactants
RSset::new(), // reactants_absent
RSset::new(), // inhibitors
RSset::new(), // inhibitors_present
RSset::new(), // products
Set::new(), // reactants
Set::new(), // reactants_absent
Set::new(), // inhibitors
Set::new(), // inhibitors_present
Set::new(), // products
),
|acc, reaction| {
if reaction.enabled(&t) {
@ -67,7 +71,7 @@ impl<'a> Iterator for TransitionsIterator<'a> {
},
);
let label = RSlabel::from(
let label = Label::from(
self.system.available_entities.clone(),
(*c).clone(),
t,
@ -77,7 +81,7 @@ impl<'a> Iterator for TransitionsIterator<'a> {
inhibitors_present,
products.clone(),
);
let new_system = RSsystem::from(
let new_system = System::from(
Rc::clone(&self.system.delta),
products,
(*k).clone(),