fmt and parser for positive set in grammar_separated

also slice with limit, implemented slice for system, changed print for
slicing trace to not use unicode

assert/src/dsl.rs

@@ -1,8 +1,8 @@
 use std::collections::HashMap;
-use serde::{Serialize, Deserialize};
 
 use rsprocess::set::BasicSet;
 use rsprocess::{element, graph, label, process, set, system, translator};
+use serde::{Deserialize, Serialize};
 
 /// If changing IntegerType in assert.rs, also change from Num to another
 /// similar parser with different return type in grammar.lalrpop in
@@ -196,7 +196,9 @@ pub enum AssertReturnValue {
 
 impl<S> Default for Assert<S> {
     fn default() -> Self {
-        Self { tree: Tree::Return(Box::new(Expression::True)) }
+        Self {
+            tree: Tree::Return(Box::new(Expression::True)),
+        }
     }
 }
 

assert/src/rsassert.rs

@@ -1,8 +1,8 @@
 use std::collections::HashMap;
-use serde::{Serialize, Deserialize};
 
 use rsprocess::translator::PrintableWithTranslator;
 use rsprocess::{graph, label, set, system, translator};
+use serde::{Deserialize, Serialize};
 
 use super::dsl::*;
 

grammar_separated/src/grammar.lalrpop

@@ -2,12 +2,9 @@ use std::rc::Rc;
 use std::str::FromStr;
 use lalrpop_util::ParseError;
 
-// use assert::{relabel, grouping};
 use rsprocess::{set, reaction, process, environment, system, label};
-use rsprocess::element::IdType;
+use rsprocess::element::{self, IdType};
 use rsprocess::translator::Translator;
-// use execution::presets;
-// use rsprocess::graph;
 use crate::custom_error;
 
 grammar(translator: &mut Translator);
@@ -197,6 +194,16 @@ pub Set: set::Set = {
                            .collect::<Vec<_>>())
 };
 
+pub PositiveSet: set::PositiveSet = {
+    <s: Separated_Empty<"{", PositiveLiteral, ",", "}">> =>
+        set::PositiveSet::from(s)
+};
+
+PositiveLiteral: (element::IdType, element::IdState) = {
+    "+" <t: Literal> => (translator.encode(t), element::IdState::Positive),
+    "-" <t: Literal> => (translator.encode(t), element::IdState::Negative),
+}
+
 
 // -----------------------------------------------------------------------------
 //                               ReactionParser

rsprocess/src/environment.rs

@@ -452,7 +452,6 @@ impl From<Vec<(IdType, Process)>> for Environment {
     }
 }
 
-
 // -----------------------------------------------------------------------------
 //                                 Confluence
 // -----------------------------------------------------------------------------

rsprocess/src/system.rs

@@ -105,6 +105,11 @@ pub trait ExtensionsSystem: BasicSystem {
     fn slice_trace(
         &self,
     ) -> Result<SlicingTrace<Self::Set, Self::Reaction, Self>, String>;
+
+    fn slice_trace_limit(
+        &self,
+        limit: usize,
+    ) -> Result<SlicingTrace<Self::Set, Self::Reaction, Self>, String>;
 }
 
 impl<T: BasicSystem> ExtensionsSystem for T {
@@ -363,6 +368,62 @@ impl<T: BasicSystem> ExtensionsSystem for T {
         // trace.enabled_reactions.pop();
         Ok(trace)
     }
+
+    #[allow(clippy::field_reassign_with_default)]
+    #[allow(clippy::type_complexity)]
+    fn slice_trace_limit(
+        &self,
+        limit: usize,
+    ) -> Result<SlicingTrace<Self::Set, Self::Reaction, Self>, String> {
+        let mut trace = SlicingTrace::default();
+
+        trace.context_elements = Rc::new(self.context_elements());
+        trace.products_elements = Rc::new(self.products_elements());
+        trace.reactions = Rc::new(self.reactions().clone());
+        trace.systems.push(Rc::new(self.clone()));
+        trace.elements.push(SlicingElement::from((
+            Self::Set::default(),
+            self.available_entities().clone(),
+        )));
+
+        let current: Option<(Self::Set, Self::Set, Vec<usize>, Self)> =
+            self.to_slicing_iterator()?.next();
+        if current.is_none() {
+            return Ok(trace);
+        }
+        let current = current.unwrap();
+
+        let (context, products, enabled_reactions, mut current) = current;
+        trace
+            .elements
+            .push(SlicingElement::from((context, products)));
+        trace
+            .enabled_reactions
+            .push(EnabledReactions::from(enabled_reactions));
+        trace.systems.push(Rc::new(current.clone()));
+
+        let mut n = limit;
+        loop {
+            n -= 1;
+            let t = current.to_slicing_iterator()?.next();
+            if let Some((context, products, enabled_reactions, next_sys)) = t
+                && n > 0
+            {
+                current = next_sys;
+                trace
+                    .elements
+                    .push(SlicingElement::from((context, products)));
+                trace
+                    .enabled_reactions
+                    .push(EnabledReactions::from(enabled_reactions));
+                trace.systems.push(Rc::new(current.clone()));
+            } else {
+                break;
+            }
+        }
+        // trace.enabled_reactions.pop();
+        Ok(trace)
+    }
 }
 
 // -----------------------------------------------------------------------------
@@ -508,7 +569,7 @@ impl BasicSystem for System {
     fn to_slicing_iterator(
         &self,
     ) -> Result<TraceIterator<'_, Self::Set, Self, Self::Process>, String> {
-        unimplemented!()
+        TraceIterator::<Self::Set, Self, Self::Process>::try_from(self)
     }
 
     fn environment(&self) -> &Self::Environment {

rsprocess/src/trace.rs

@@ -192,10 +192,8 @@ impl EnabledReactions {
     }
 }
 
-
 #[derive(Clone, Debug, Hash, Serialize, Deserialize)]
-pub struct SlicingTrace<S, R, Sys>
+pub struct SlicingTrace<S, R, Sys> {
-{
     pub elements: Vec<SlicingElement<S>>,
     pub enabled_reactions: Vec<EnabledReactions>,
 
@@ -411,14 +409,14 @@ impl<
                 if elements.peek().is_some() {
                     writeln!(
                         f,
-                        "{}\n\t|\n{: ^17}\n\t|\n\t▼",
+                        "{}\n\t\t|\n{: ^17}\n\t\t|\n\t\tv",
                         Formatter::from(translator, el),
                         format!("({})", Formatter::from(translator, r)),
                     )?;
                 } else {
                     writeln!(
                         f,
-                        "{}\n\t|\n{: ^17}\n\t|\n\t?",
+                        "{}\n\t\t|\n{: ^17}\n\t\t|\n\t\t?",
                         Formatter::from(translator, el),
                         format!("({})", Formatter::from(translator, r)),
                     )?;
@@ -426,7 +424,7 @@ impl<
             } else if elements.peek().is_some() {
                 writeln!(
                     f,
-                    "{}\n\t|\n\t|\n\t|\n\t▼",
+                    "{}\n\t\t|\n\t\t|\n\t\t|\n\t\tv",
                     Formatter::from(translator, el)
                 )?;
             } else {

rsprocess/src/transitions.rs

@@ -225,11 +225,56 @@ impl<'a> TryFrom<&'a PositiveSystem>
     }
 }
 
+impl<'a> TryFrom<&'a System> for TraceIterator<'a, Set, System, Process> {
+    type Error = String;
+
+    fn try_from(value: &'a System) -> Result<Self, Self::Error> {
+        match value.unfold() {
+            | Ok(o) => Ok(Self {
+                choices_iterator: o.into_iter(),
+                system: value,
+            }),
+            | Err(e) => Err(e),
+        }
+    }
+}
+
 impl<'a> Iterator for TraceIterator<'a, Set, System, Process> {
     type Item = (Set, Set, Vec<usize>, System);
 
     fn next(&mut self) -> Option<Self::Item> {
-        unimplemented!()
+        let (context, k) = self.choices_iterator.next()?;
+        let total_entities =
+            self.system.available_entities().union(context.as_ref());
+
+        let (enabled_reaction_positions, all_products) =
+            self.system.reactions().iter().enumerate().fold(
+                (vec![], Set::default()),
+                |mut acc, (pos, reaction)| {
+                    if reaction.enabled(&total_entities) {
+                        acc.0.push(pos);
+                        (acc.0, acc.1.union(&reaction.products))
+                    } else {
+                        acc
+                    }
+                },
+            );
+
+        let new_system = System::from(
+            Rc::clone(&self.system.delta),
+            // all_products.add_unique(&self.system.
+            // negated_products_elements()),
+            all_products.clone(),
+            (*k).clone(),
+            Rc::clone(&self.system.reaction_rules),
+        );
+
+        Some((
+            context.as_ref().clone(),
+            all_products,
+            enabled_reaction_positions,
+            new_system,
+        ))
     }
 }