custom grammar errors, better handling of user facing errors

fuckery for modules in grammar, maybe fixable?
This commit is contained in:
elvis
2025-09-16 23:09:20 +02:00
parent e41d92ac36
commit d458787a81
8 changed files with 624 additions and 345 deletions

View File

@ -92,9 +92,11 @@ pub enum Instruction {
},
Target {
so: SaveOptions,
limit: Option<usize>,
},
Run {
so: SaveOptions,
limit: Option<usize>,
},
Loop {
symbol: String,
@ -132,43 +134,45 @@ pub enum System {
impl System {
/// Deserialize the graph if applicable.
pub fn compute(
&self,
self,
translator: Translator,
) -> Result<EvaluatedSystem, String> {
match self {
| Self::System { sys } => Ok(EvaluatedSystem::System {
sys: sys.to_owned(),
translator,
}),
| Self::System { sys } =>
Ok(EvaluatedSystem::from_sys(sys, translator)),
| Self::Deserialize { path } => {
let (graph, translator) = deserialize(path.into())?;
Ok(EvaluatedSystem::Graph { graph, translator })
let (graph, translator) = deserialize(path)?;
Ok(EvaluatedSystem::from_graph(graph, translator))
},
}
}
}
#[derive(Clone)]
pub enum EvaluatedSystem {
Graph {
graph: graph::SystemGraph,
translator: Translator,
},
System {
sys: system::System,
translator: Translator,
},
pub struct EvaluatedSystem {
sys: Option<system::System>,
graph: Option<graph::SystemGraph>,
positive: Option<system::PositiveSystem>,
translator: Translator,
}
impl EvaluatedSystem {
pub fn get_translator(&mut self) -> &mut Translator {
match self {
| EvaluatedSystem::Graph {
graph: _,
translator,
} => translator,
| EvaluatedSystem::System { sys: _, translator } => translator,
}
&mut self.translator
}
pub fn from_graph(
graph: graph::SystemGraph,
translator: Translator
) -> Self {
Self { sys: None, graph: Some(graph), positive: None, translator }
}
pub fn from_sys(
sys: system::System,
translator: Translator,
) -> Self {
Self { sys: Some(sys), graph: None, positive: None, translator }
}
}
@ -248,65 +252,127 @@ fn save_file(contents: &String, path_string: String) -> Result<(), String> {
/// Prints statistics of the system.
/// Equivalent main_do(stat) or main_do(stat, MissingE)
pub fn stats(system: &EvaluatedSystem) -> Result<String, String> {
match system {
| EvaluatedSystem::System { sys, translator } =>
Ok(sys.statistics(translator)),
| EvaluatedSystem::Graph { graph, translator } => {
let Some(sys) = graph.node_weights().next() else {
return Err("No node found in graph.".into());
};
Ok(sys.statistics(translator))
},
if let Some(sys) = &system.sys {
Ok(sys.statistics(&system.translator))
} else if let Some(graph) = &system.graph {
let Some(sys) = graph.node_weights().next() else {
return Err("No node found in graph.".into());
};
Ok(sys.statistics(&system.translator))
} else {
Err("Statistics not available for supplied system.".into())
}
}
/// Prints a final set of entities in a terminating Reaction System.
/// The system needs to terminate to return.
/// Equivalent to main_do(target, E)
pub fn target(system: &EvaluatedSystem) -> Result<String, String> {
let (res, translator) = match system {
| EvaluatedSystem::System { sys, translator } =>
(sys.target()?, translator),
| EvaluatedSystem::Graph { graph, translator } => {
let Some(sys) = graph.node_weights().next() else {
return Err("No node found in graph.".into());
};
(sys.target()?, translator)
},
};
Ok(format!(
"After {} steps we arrive at state:\n{}",
res.0,
translator::Formatter::from(translator, &res.1)
))
pub fn target(
system: &EvaluatedSystem,
limit: Option<usize>
) -> Result<String, String> {
if let Some(sys) = &system.sys {
let res = if let Some(limit) = limit {
sys.target_limit(limit)?
} else {
sys.target()?
};
Ok(format!(
"After {} steps we arrive at state:\n{}",
res.0,
translator::Formatter::from(&system.translator, &res.1)
))
} else if let Some(graph) = &system.graph {
let Some(sys) = graph.node_weights().next() else {
return Err("No node found in graph.".into());
};
let res = if let Some(limit) = limit {
sys.target_limit(limit)?
} else {
sys.target()?
};
Ok(format!(
"After {} steps we arrive at state:\n{}",
res.0,
translator::Formatter::from(&system.translator, &res.1)
))
} else if let Some(positive) = &system.positive {
let res = if let Some(limit) = limit {
positive.target_limit(limit)?
} else {
positive.target()?
};
Ok(format!(
"After {} steps we arrive at state:\n{}",
res.0,
translator::Formatter::from(&system.translator, &res.1)
))
} else {
Err("Target not available for supplied system.".into())
}
}
/// Finds the list of traversed states in a (deterministic) terminating
/// reaction.
/// The system needs to terminate to return.
/// equivalent to main_do(run,Es)
pub fn traversed(system: &EvaluatedSystem) -> Result<String, String> {
let (res, translator) = match system {
| EvaluatedSystem::System { sys, translator } =>
(sys.run_separated()?, translator),
| EvaluatedSystem::Graph { graph, translator } => {
let Some(sys) = graph.node_weights().next() else {
return Err("No node found in graph.".into());
};
(sys.run_separated()?, translator)
},
};
pub fn traversed(
system: &EvaluatedSystem,
limit: Option<usize>
) -> Result<String, String> {
let mut output = String::new();
output.push_str("The trace is composed by the set of entities: ");
for (e, _c, _t) in res {
output.push_str(&format!(
"{}",
translator::Formatter::from(translator, &e)
));
if let Some(sys) = &system.sys {
let res = if let Some(limit) = limit {
sys.run_separated_limit(limit)?
} else {
sys.run_separated()?
};
output.push_str("The trace is composed by the set of entities: ");
for (e, _c, _t) in res {
output.push_str(&format!(
"{}",
translator::Formatter::from(&system.translator, &e)
));
}
Ok(output)
} else if let Some(graph) = &system.graph {
let Some(sys) = graph.node_weights().next() else {
return Err("No node found in graph.".into());
};
let res = if let Some(limit) = limit {
sys.run_separated_limit(limit)?
} else {
sys.run_separated()?
};
output.push_str("The trace is composed by the set of entities: ");
for (e, _c, _t) in res {
output.push_str(&format!(
"{}",
translator::Formatter::from(&system.translator, &e)
));
}
Ok(output)
} else if let Some(positive) = &system.positive {
let res = if let Some(limit) = limit {
positive.run_separated_limit(limit)?
} else {
positive.run_separated()?
};
output.push_str("The trace is composed by the set of entities: ");
for (e, _c, _t) in res {
output.push_str(&format!(
"{}",
translator::Formatter::from(&system.translator, &e)
));
}
Ok(output)
} else {
Err("Run not available for supplied system.".into())
}
Ok(output)
}
/// Finds the looping list of states in a reaction system with a perpetual
@ -318,38 +384,68 @@ pub fn hoop(
symbol: String,
) -> Result<String, String> {
use system::LoopSystem;
let (res, translator) = match system {
| EvaluatedSystem::System { sys, translator } => (sys, translator),
| EvaluatedSystem::Graph { graph, translator } => {
let Some(sys) = graph.node_weights().next() else {
return Err("No node found in graph.".into());
};
(sys, translator)
},
};
// we retrieve the id for "x" and use it to find the corresponding loop
let Some(id) = translator.encode_not_mut(&symbol) else {
// we retrieve the id for the input symbol, error if not found.
let Some(id) = system.translator.encode_not_mut(&symbol) else {
return Err(format!("Symbol {symbol} not found."));
};
let res = match res.lollipops_only_loop_named(id) {
| Some(o) => o,
| None => {
return Err("No loop found.".into());
},
};
let mut output = String::new();
output.push_str("The loop is composed by the sets: ");
for e in res {
output.push_str(&format!(
"{}",
translator::Formatter::from(translator, &e)
));
}
if let Some(sys) = &system.sys {
let res = match sys.lollipops_only_loop_named(id) {
| Some(o) => o,
| None => {
return Err("No loop found.".into());
},
};
output.push_str("The loop is composed by the sets: ");
for e in res {
output.push_str(&format!(
"{}",
translator::Formatter::from(&system.translator, &e)
));
}
Ok(output)
Ok(output)
} else if let Some(graph) = &system.graph {
let Some(sys) = graph.node_weights().next() else {
return Err("No node found in graph.".into());
};
let res = match sys.lollipops_only_loop_named(id) {
| Some(o) => o,
| None => {
return Err("No loop found.".into());
},
};
output.push_str("The loop is composed by the sets: ");
for e in res {
output.push_str(&format!(
"{}",
translator::Formatter::from(&system.translator, &e)
));
}
Ok(output)
} else if let Some(positive) = &system.positive {
let res = match positive.lollipops_only_loop_named(id) {
| Some(o) => o,
| None => {
return Err("No loop found.".into());
},
};
output.push_str("The loop is composed by the sets: ");
for e in res {
output.push_str(&format!(
"{}",
translator::Formatter::from(&system.translator, &e)
));
}
Ok(output)
} else {
Err("Loop not available for supplied system.".into())
}
}
/// Finds the frequency of each entity in the traversed states for a
@ -358,22 +454,33 @@ pub fn hoop(
pub fn freq(system: &EvaluatedSystem) -> Result<String, String> {
use frequency::BasicFrequency;
let (sys, translator) = match system {
| EvaluatedSystem::System { sys, translator } => (sys, translator),
| EvaluatedSystem::Graph { graph, translator } => {
let Some(sys) = graph.node_weights().next() else {
return Err("No node found in graph.".into());
};
(sys, translator)
},
};
if let Some(sys) = &system.sys {
let res = frequency::Frequency::naive_frequency(sys)?;
let res = frequency::Frequency::naive_frequency(sys)?;
Ok(format!(
"Frequency of encountered symbols:\n{}",
translator::Formatter::from(&system.translator, &res)
))
} else if let Some(graph) = &system.graph {
let Some(sys) = graph.node_weights().next() else {
return Err("No node found in graph.".into());
};
let res = frequency::Frequency::naive_frequency(sys)?;
Ok(format!(
"Frequency of encountered symbols:\n{}",
translator::Formatter::from(translator, &res)
))
Ok(format!(
"Frequency of encountered symbols:\n{}",
translator::Formatter::from(&system.translator, &res)
))
} else if let Some(positive) = &system.positive {
let res = frequency::PositiveFrequency::naive_frequency(positive)?;
Ok(format!(
"Frequency of encountered symbols:\n{}",
translator::Formatter::from(&system.translator, &res)
))
} else {
Err("Frequency not available for supplied system.".into())
}
}
/// Finds the frequency of each entity in the limit loop of a nonterminating
@ -389,33 +496,65 @@ where
{
use frequency::BasicFrequency;
let (sys, translator): (&system::System, &mut Translator) = match system {
| EvaluatedSystem::System { sys, translator } => (sys, translator),
| EvaluatedSystem::Graph { graph, translator } => {
let Some(sys) = graph.node_weights().next() else {
return Err("No node found in graph.".into());
};
(sys, translator)
},
};
let (_, sets) =
read_file(&mut system.translator, experiment, parser_experiment)?;
let (_, sets) = read_file(translator, experiment, parser_experiment)?;
if let Some(sys) = &system.sys {
let res = match frequency::Frequency::limit_frequency(
&sets,
&sys.reaction_rules,
&sys.available_entities,
) {
| Some(e) => e,
| None => {
return Err("Error calculating frequency.".into());
},
};
let res = match frequency::Frequency::limit_frequency(
&sets,
&sys.reaction_rules,
&sys.available_entities,
) {
| Some(e) => e,
| None => {
return Err("Error calculating frequency.".into());
},
};
Ok(format!(
"Frequency of encountered symbols:\n{}",
translator::Formatter::from(&system.translator, &res)
))
} else if let Some(graph) = &system.graph {
let Some(sys) = graph.node_weights().next() else {
return Err("No node found in graph.".into());
};
Ok(format!(
"Frequency of encountered symbols:\n{}",
translator::Formatter::from(translator, &res)
))
let res = match frequency::Frequency::limit_frequency(
&sets,
&sys.reaction_rules,
&sys.available_entities,
) {
| Some(e) => e,
| None => {
return Err("Error calculating frequency.".into());
},
};
Ok(format!(
"Frequency of encountered symbols:\n{}",
translator::Formatter::from(&system.translator, &res)
))
} else if let Some(_positive) = &system.positive {
todo!()
// let res = match frequency::PositiveFrequency::limit_frequency(
// &sets,
// &positive.reaction_rules,
// &positive.available_entities,
// ) {
// | Some(e) => e,
// | None => {
// return Err("Error calculating frequency.".into());
// },
// };
// Ok(format!(
// "Frequency of encountered symbols:\n{}",
// translator::Formatter::from(&system.translator, &res)
// ))
} else {
Err("LimitFrequency not available for supplied system.".into())
}
}
/// Finds the frequency of each entity in the traversed loops of a terminating
@ -433,48 +572,69 @@ where
{
use frequency::BasicFrequency;
let (sys, translator): (&system::System, &mut Translator) = match system {
| EvaluatedSystem::System { sys, translator } => (sys, translator),
| EvaluatedSystem::Graph { graph, translator } => {
let Some(sys) = graph.node_weights().next() else {
return Err("No node found in graph".into());
};
(sys, translator)
},
};
let (weights, sets) =
read_file(&mut system.translator, experiment, parser_experiment)?;
let (weights, sets) = read_file(translator, experiment, parser_experiment)?;
if let Some(sys) = &system.sys {
let res = match frequency::Frequency::fast_frequency(
&sets,
&sys.reaction_rules,
&sys.available_entities,
&weights,
) {
| Some(e) => e,
| None => {
return Err("Error calculating frequency.".into());
},
};
let res = match frequency::Frequency::fast_frequency(
&sets,
&sys.reaction_rules,
&sys.available_entities,
&weights,
) {
| Some(e) => e,
| None => {
return Err("Error calculating frequency.".into());
},
};
Ok(format!(
"Frequency of encountered symbols:\n{}",
translator::Formatter::from(&system.translator, &res)
))
} else if let Some(graph) = &system.graph {
let Some(sys) = graph.node_weights().next() else {
return Err("No node found in graph".into());
};
Ok(format!(
"Frequency of encountered symbols:\n{}",
translator::Formatter::from(translator, &res)
))
let res = match frequency::Frequency::fast_frequency(
&sets,
&sys.reaction_rules,
&sys.available_entities,
&weights,
) {
| Some(e) => e,
| None => {
return Err("Error calculating frequency.".into());
},
};
Ok(format!(
"Frequency of encountered symbols:\n{}",
translator::Formatter::from(&system.translator, &res)
))
} else if let Some(_positive) = &system.positive {
todo!()
} else {
Err("FastFrequency not available for supplied system.".into())
}
}
/// Computes the LTS.
/// equivalent to main_do(digraph, Arcs) or to main_do(advdigraph, Arcs)
pub fn digraph(system: &mut EvaluatedSystem) -> Result<(), String> {
if let EvaluatedSystem::System { sys, translator } = system {
*system = EvaluatedSystem::Graph {
graph: sys.digraph()?,
translator: translator.to_owned(),
};
if let Some(sys) = &system.sys && system.graph.is_none() {
let graph = sys.digraph()?;
system.graph = Some(graph);
} else if let Some(positive) = &system.positive && system.graph.is_none() {
let _graph = positive.digraph()?;
todo!()
}
Ok(())
}
/// Given a graph and a function that identifies nodes of the graph, merges
/// nodes with the same identifier.
pub fn grouping(
system: &mut EvaluatedSystem,
group: &assert::grouping::Assert,
@ -482,9 +642,9 @@ pub fn grouping(
let mut buckets = HashMap::new();
let mut leader: HashMap<petgraph::prelude::NodeIndex, _> = HashMap::new();
if let EvaluatedSystem::Graph { graph, translator } = system {
if let Some(graph) = &mut system.graph {
for node in graph.node_indices() {
let val = group.execute(graph, &node, translator)?;
let val = group.execute(graph, &node, &mut system.translator)?;
println!("node: {node:?} -> val: {val:?}");
buckets.entry(val.clone()).or_insert(vec![]).push(node);
let l = buckets.get(&val).unwrap().first().unwrap();
@ -541,59 +701,37 @@ where
{
use assert::relabel::AssertReturnValue;
let system_b = read_file(
system_a.get_translator(),
system_b.to_string(),
parser_instructions,
)?;
let mut system_b = match system_b
let system_b = read_file(&mut system_a.translator,
system_b.to_string(),
parser_instructions)?;
let mut system_b = system_b
.system
.compute(system_a.get_translator().clone())?
{
| EvaluatedSystem::System { sys, translator } =>
EvaluatedSystem::System { sys, translator },
| EvaluatedSystem::Graph { graph, translator } => {
if translator != *system_a.get_translator() {
return Err("Bisimilarity not implemented for systems with \
different encodings. Serialize the systems \
with the same translator."
.into());
}
EvaluatedSystem::Graph { graph, translator }
},
};
.compute(system_a.get_translator().clone())?;
if system_b.translator != system_a.translator {
return Err("Bisimilarity not implemented for systems with different \
encodings. Serialize the systems with the same translator."
.into());
}
digraph(system_a)?;
digraph(&mut system_b)?;
// since we ran digraph on both they have to be graphs
match (system_a, &mut system_b) {
| (
EvaluatedSystem::Graph {
graph: a,
translator: _,
},
EvaluatedSystem::Graph {
graph: b,
translator: translator_b,
},
) => {
let a: Graph<system::System, AssertReturnValue> =
a.map_edges(edge_relabeler, translator_b)?;
let b: Graph<system::System, AssertReturnValue> =
b.map_edges(edge_relabeler, translator_b)?;
Ok(format!(
"{}",
// bisimilarity::bisimilarity_kanellakis_smolka::bisimilarity(&
// &a, &&b)
// bisimilarity::bisimilarity_paige_tarjan::bisimilarity_ignore_labels(&&a, &&b)
bisimilarity::bisimilarity_paige_tarkan::bisimilarity(&&a, &&b)
))
},
| _ => {
unreachable!()
},
}
// since we ran digraph on both they have to have valid graphs
let a: Graph<system::System, AssertReturnValue> =
system_a.graph.as_ref().unwrap()
.map_edges(edge_relabeler, &mut system_a.translator)?;
let b: Graph<system::System, AssertReturnValue> =
system_b.graph.unwrap().map_edges(edge_relabeler, &mut system_b.translator)?;
Ok(format!(
"{}",
// bisimilarity::bisimilarity_kanellakis_smolka::bisimilarity(&
// &a, &&b)
// bisimilarity::bisimilarity_paige_tarjan::bisimilarity_ignore_labels(&&a, &&b)
bisimilarity::bisimilarity_paige_tarkan::bisimilarity(&&a, &&b)
))
}
// -----------------------------------------------------------------------------
@ -608,33 +746,29 @@ pub fn dot(
node_color: graph::NodeColor,
edge_color: graph::EdgeColor,
) -> Result<String, String> {
match system {
| EvaluatedSystem::System {
sys: _,
translator: _,
} => Err("Supplied system is not a graph".into()),
| EvaluatedSystem::Graph { graph, translator } => {
let rc_translator = Rc::new(translator.clone());
let modified_graph = graph.map(
node_display.generate(Rc::clone(&rc_translator), graph),
edge_display.generate(Rc::clone(&rc_translator), graph),
);
if let Some(graph) = &system.graph {
let rc_translator = Rc::new(system.translator.clone());
let modified_graph = graph.map(
node_display.generate(Rc::clone(&rc_translator), graph),
edge_display.generate(Rc::clone(&rc_translator), graph),
);
let graph = Rc::new(graph.to_owned());
let graph = Rc::new(graph.to_owned());
let node_formatter = node_color
.generate(Rc::clone(&graph), translator.encode_not_mut("*"));
let edge_formatter = edge_color.generate(Rc::clone(&graph));
let node_formatter = node_color
.generate(Rc::clone(&graph), system.translator.encode_not_mut("*"));
let edge_formatter = edge_color.generate(Rc::clone(&graph));
let dot = dot::Dot::with_attr_getters(
&modified_graph,
&[],
&edge_formatter,
&node_formatter,
);
let dot = dot::Dot::with_attr_getters(
&modified_graph,
&[],
&edge_formatter,
&node_formatter,
);
Ok(format!("{dot}"))
},
Ok(format!("{dot}"))
} else {
Err("Supplied system is not a graph".into())
}
}
@ -644,60 +778,52 @@ pub fn graphml(
node_display: graph::NodeDisplay,
edge_display: graph::EdgeDisplay,
) -> Result<String, String> {
match system {
| EvaluatedSystem::System {
sys: _,
translator: _,
} => Err("Supplied system is not a graph".into()),
| EvaluatedSystem::Graph { graph, translator } => {
let rc_translator = Rc::new(translator.to_owned());
if let Some(graph) = &system.graph {
let rc_translator = Rc::new(system.translator.to_owned());
// map each value to the corresponding value we want to display
let modified_graph = graph.map(
node_display.generate(Rc::clone(&rc_translator), graph),
edge_display.generate(rc_translator, graph),
);
// map each value to the corresponding value we want to display
let modified_graph = graph.map(
node_display.generate(Rc::clone(&rc_translator), graph),
edge_display.generate(rc_translator, graph),
);
use petgraph_graphml::GraphMl;
let graphml = GraphMl::new(&modified_graph)
.pretty_print(true)
.export_node_weights_display()
.export_edge_weights_display();
use petgraph_graphml::GraphMl;
let graphml = GraphMl::new(&modified_graph)
.pretty_print(true)
.export_node_weights_display()
.export_edge_weights_display();
Ok(format!("{graphml}"))
},
Ok(format!("{graphml}"))
} else {
Err("Supplied system is not a graph".into())
}
}
/// Writes the specified graph, translator tuple to file.
/// Writes the specified graph and translator to file.
/// N.B. graph size in memory might be much larger after serialization and
/// deserialization.
pub fn serialize(system: &EvaluatedSystem, path: String) -> Result<(), String> {
match system {
| EvaluatedSystem::System {
sys: _,
translator: _,
} => Err("Supplied system is not a graph".into()),
| EvaluatedSystem::Graph { graph, translator } => {
// relative path
let mut path = std::path::PathBuf::from(path);
path.set_extension("cbor");
if let Some(graph) = &system.graph {
// relative path
let mut path = std::path::PathBuf::from(path);
path.set_extension("cbor");
let f = match fs::File::create(&path) {
| Ok(f) => f,
| Err(_) => {
return Err(format!(
"Error creating file {}.",
path.to_str().unwrap()
));
},
};
let f = match fs::File::create(&path) {
| Ok(f) => f,
| Err(_) => {
return Err(format!(
"Error creating file {}.",
path.to_str().unwrap()
));
},
};
match serialize::ser(f, graph, translator) {
| Ok(_) => Ok(()),
| Err(_) => Err("Error during serialization.".into()),
}
},
match serialize::ser(f, graph, &system.translator) {
| Ok(_) => Ok(()),
| Err(_) => Err("Error during serialization.".into()),
}
} else {
Err("Supplied system is not a graph".into())
}
}
@ -758,11 +884,11 @@ fn execute<P: FileParsers>(
| Instruction::Stats { so } => {
save_options!(stats(system)?, so);
},
| Instruction::Target { so } => {
save_options!(target(system)?, so);
| Instruction::Target { so, limit } => {
save_options!(target(system, limit)?, so);
},
| Instruction::Run { so } => {
save_options!(traversed(system)?, so);
| Instruction::Run { so, limit } => {
save_options!(traversed(system, limit)?, so);
},
| Instruction::Loop { symbol, so } => {
save_options!(hoop(system, symbol)?, so);